STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0060PFAM: protein of unknown function DUF1416; KEGG: fra:Francci3_0450 protein of unknown function DUF1416. (96 aa)    
Predicted Functional Partners:
Acel_0059
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: tfu:Tfu_2719 thiosulfate sulfurtransferase.
 
  
 0.923
Acel_0792
KEGG: sma:SAV5589 hypothetical protein.
  
     0.774
Acel_1689
PFAM: Mov34/MPN/PAD-1 family protein; KEGG: tfu:Tfu_2370 Mov34/MPN/PAD-1.
  
     0.732
Acel_0565
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sco:SCO5244 anti-sigma factor.
  
     0.686
Acel_1599
KEGG: fra:Francci3_1159 hypothetical protein.
  
     0.672
Acel_2001
Arsenite efflux ATP-binding protein ArsA; KEGG: tfu:Tfu_0112 putative ion-transporting ATPase; TC 3.A.4.1.1.
  
     0.664
Acel_1784
KEGG: sma:SAV3097 hypothetical protein.
  
     0.663
Acel_0969
KEGG: mpa:MAP1929c hypothetical protein.
  
     0.646
Acel_1485
KEGG: sco:SCO5788 hypothetical protein.
  
     0.627
Acel_1141
KEGG: sco:SCO1839 transcriptional regulator.
  
     0.591
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.