STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0066PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: sma:SAV4624 protease; Serine peptidase; MEROPS family S33. (540 aa)    
Predicted Functional Partners:
Acel_0069
PFAM: aldo/keto reductase; KEGG: fra:Francci3_0458 aldo/keto reductase.
   
   0.549
Acel_0179
TIGRFAM: esterase, PHB depolymerase family; PFAM: cellulose-binding, family II; type 3a, cellulose-binding domain protein; KEGG: afm:Afu8g06570 acetyl xylan esterase.
  
     0.544
Acel_0070
KEGG: sco:SCO4200 hypothetical protein.
       0.530
Acel_0067
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: fra:Francci3_0460 transcriptional regulator, XRE family.
  
    0.519
Acel_0068
Hypothetical protein.
       0.519
Acel_0071
PFAM: Appr-1-p processing domain protein; KEGG: nfa:nfa36990 hypothetical protein.
   
   0.486
Acel_0616
PFAM: glycoside hydrolase, family 5; cellulose-binding, family II; type 3a, cellulose-binding domain protein; KEGG: bld:BLi01883 hypothetical protein.
  
     0.463
Acel_0868
KEGG: sma:SAV5784 hypothetical protein.
  
     0.443
Acel_0619
PFAM: cellulose-binding, family II; glycoside hydrolase, family 12; KEGG: sma:SAV555 endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
     0.427
Acel_0615
PFAM: glycoside hydrolase, family 6; cellulose-binding, family II; type 3a, cellulose-binding domain protein; glycoside hydrolase, family 12; Fibronectin, type III domain protein; KEGG: sma:SAV557 cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
     0.403
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.