Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_0098KEGG: fra:Francci3_4393 hypothetical protein. (210 aa)    
Predicted Functional Partners:
Acel_0099
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
       0.809
Acel_0097
KEGG: nfa:nfa53000 hypothetical protein.
  
    0.767
Acel_0055
KEGG: fra:Francci3_4326 hypothetical protein.
  
     0.502
Acel_1594
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: nfa:nfa49630 putative two-component system sensor kinase.
  
     0.495
Acel_0065
KEGG: sma:SAV4026 AmfC protein.
  
     0.487
Acel_1784
KEGG: sma:SAV3097 hypothetical protein.
  
     0.468
Acel_0060
PFAM: protein of unknown function DUF1416; KEGG: fra:Francci3_0450 protein of unknown function DUF1416.
  
     0.440
Acel_0418
KEGG: tws:TW612 conserved hypothetical protein containing glycosyltransferase domain.
  
     0.433
Acel_1485
KEGG: sco:SCO5788 hypothetical protein.
  
     0.433
Acel_1889
Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: cgb:cg3246 bacterial regulatory protein, MarR family.
  
     0.428
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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