STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0128PFAM: glycoside hydrolase, family 3 domain protein; KEGG: sco:SCO5235 sugar hydrolase. (475 aa)    
Predicted Functional Partners:
Acel_0603
PFAM: glycoside hydrolase, family 18; SMART: chitinase II; KEGG: cvi:CV4240 probable chitinase; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.923
Acel_1460
PFAM: glycoside hydrolase, family 18; Carbohydrate-binding, CenC domain protein domain protein; Carbohydrate-binding family V/XII; SMART: chitinase II; KEGG: cvi:CV4240 probable chitinase.
  
  
 0.923
Acel_2033
Chitinase family 18; PFAM: Carbohydrate-binding, CenC domain protein domain protein; Carbohydrate-binding family V/XII; KEGG: sma:SAV1751 chitinase A.
 
  
 0.922
Acel_0072
beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase, family 20; KEGG: sma:SAV5268 putative beta-N-acetylhexosaminidase.
    
 0.909
Acel_0557
KEGG: sth:STH1280 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase.
 
  
 0.609
Acel_0556
Glutamine--fructose-6-phosphate transaminase; PFAM: sugar isomerase (SIS); KEGG: ccr:CC0444 SIS domain protein.
    
 0.583
Acel_1520
KEGG: cef:CE2653 hypothetical protein.
  
  
 0.506
Acel_0552
PFAM: extracellular solute-binding protein, family 1; KEGG: sma:SAV3022 sugar ABC transporter solute-binding protein; TC 3.A.1.1.-.
 
     0.469
Acel_1659
Beta-glucosidase; PFAM: glycoside hydrolase, family 3 domain protein; KEGG: aor:AO090010000034 beta-glucosidase-related glycosidases.
  
     0.421
Acel_0555
PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: sth:STH292 hypothetical protein.
 
    0.413
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.