Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acel_0149 | Acel_0150 | Acel_0149 | Acel_0150 | KEGG: nfa:nfa19470 hypothetical protein. | PFAM: UbiA prenyltransferase; KEGG: tma:TM1528 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.477 |
Acel_0150 | Acel_0149 | Acel_0150 | Acel_0149 | PFAM: UbiA prenyltransferase; KEGG: tma:TM1528 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | KEGG: nfa:nfa19470 hypothetical protein. | 0.477 |
Acel_0150 | Acel_0151 | Acel_0150 | Acel_0151 | PFAM: UbiA prenyltransferase; KEGG: tma:TM1528 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | Deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: mpa:MAP3081 deoxyribodipyrimidine photo-lyase. | 0.516 |
Acel_0150 | Acel_1663 | Acel_0150 | Acel_1663 | PFAM: UbiA prenyltransferase; KEGG: tma:TM1528 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | Physarolisin II; PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sma:SAV5949 serine protease, subtilase family; Serine peptidase; MEROPS family S53. | 0.424 |
Acel_0150 | menG | Acel_0150 | Acel_0265 | PFAM: UbiA prenyltransferase; KEGG: tma:TM1528 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.940 |
Acel_0151 | Acel_0150 | Acel_0151 | Acel_0150 | Deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: mpa:MAP3081 deoxyribodipyrimidine photo-lyase. | PFAM: UbiA prenyltransferase; KEGG: tma:TM1528 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.516 |
Acel_1663 | Acel_0150 | Acel_1663 | Acel_0150 | Physarolisin II; PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sma:SAV5949 serine protease, subtilase family; Serine peptidase; MEROPS family S53. | PFAM: UbiA prenyltransferase; KEGG: tma:TM1528 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.424 |
menG | Acel_0150 | Acel_0265 | Acel_0150 | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | PFAM: UbiA prenyltransferase; KEGG: tma:TM1528 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.940 |