STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0153PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa37220 putative ABC transporter ATP-binding protein. (316 aa)    
Predicted Functional Partners:
Acel_0910
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll1054 ABC transporter ATP-binding protein; TC 3.A.1.4.-.
 
    
0.906
Acel_0152
Hypothetical protein; KEGG: sco:SCO6361 integral membrane protein.
       0.773
Acel_1086
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fra:Francci3_0345 ABC transporter related; TC 3.A.1.4.-.
 
     
0.603
Acel_0340
PFAM: ABC-2 type transporter; KEGG: fra:Francci3_1473 ABC-2.
 
  
 0.598
Acel_0928
KEGG: sma:SAV4868 putative ABC transporter membrane protein.
 
 
 0.522
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
    
0.520
Acel_1626
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF1469 ABC transporter, ATP-binding protein.
  
     0.511
Acel_1142
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: fra:Francci3_1676 ABC transporter related.
 
0.441
Acel_1368
PFAM: ABC-2 type transporter; KEGG: sco:SCO3338 putative integral membrane protein.
 
  
 0.437
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.