STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0155KEGG: fra:Francci3_0065 hypothetical protein. (127 aa)    
Predicted Functional Partners:
disA
Protein of unknown function DUF147; Participates in a DNA-damage check-point. DisA forms globular foci that rapidly scan along the chromosomes searching for lesions.
  
     0.741
Acel_0391
PFAM: 2',5' RNA ligase; KEGG: fra:Francci3_0662 2',5' RNA ligase.
  
     0.656
Acel_0015
PFAM: protein of unknown function DUF881; KEGG: pac:PPA0183 membrane spanning protein DUF881.
  
     0.572
Acel_1228
PFAM: protein of unknown function DUF881; KEGG: mpa:MAP1538 hypothetical protein.
  
     0.545
Acel_1229
PFAM: protein of unknown function DUF1290; KEGG: sco:SCO1386 integral membrane protein.
  
     0.531
Acel_1146
KEGG: fra:Francci3_1908 hypothetical protein.
  
     0.529
Acel_1230
PFAM: protein of unknown function DUF881; KEGG: sco:SCO1387 membrane associated protein.
  
     0.526
Acel_1332
KEGG: fra:Francci3_3216 hypothetical protein.
  
     0.484
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
       0.480
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.