STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0157KEGG: tfu:Tfu_0369 hypothetical protein. (238 aa)    
Predicted Functional Partners:
Acel_1981
KEGG: tfu:Tfu_0127 putative integral membrane protein.
 
  
 0.775
Acel_1983
KEGG: sco:SCO3557 septum site determining protein.
 
     0.736
Acel_1980
PFAM: type II secretion system protein; KEGG: tfu:Tfu_0126 putative integral membrane protein.
 
  
 0.722
Acel_1978
KEGG: sco:SCO3552 hypothetical protein.
  
  
 0.711
Acel_0975
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rfr:Rfer_0798 response regulator receiver domain protein.
  
  
 0.703
Acel_1752
KEGG: fra:Francci3_0773 ATPases involved in chromosome partitioning-like.
  
  
 0.703
Acel_1521
PFAM: GCN5-related N-acetyltransferase; KEGG: fra:Francci3_3572 GCN5-related N-acetyltransferase.
  
     0.663
Acel_1738
PFAM: type II secretion system protein; KEGG: fra:Francci3_0780 type II secretion system protein.
  
  
 0.650
Acel_1737
PFAM: type II secretion system protein; KEGG: fra:Francci3_0781 type II secretion system protein.
  
  
 0.645
Acel_0158
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
       0.557
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.