STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0171KEGG: sco:SCO3177 hypothetical protein. (289 aa)    
Predicted Functional Partners:
Acel_1838
KEGG: fra:Francci3_3838 hypothetical protein.
  
     0.608
Acel_0170
PFAM: GCN5-related N-acetyltransferase; KEGG: tfu:Tfu_0377 ribosomal-protein-alanine N-acetyltransferase.
       0.528
Acel_0944
PFAM: cobalt transport protein; KEGG: sma:SAV5848 integral membrane protein.
  
     0.512
Acel_0946
TIGRFAM: LPXTG-motif cell wall anchor domain; KEGG: sco:SCO2321 secreted protein.
  
     0.510
Acel_0942
KEGG: sco:SCO2325 integral membrane protein.
  
     0.440
Acel_0169
TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: tfu:Tfu_0376 molybdopterin binding domain.
       0.428
Acel_0461
KEGG: sma:SAV5044 secreted protein.
  
     0.417
Acel_0922
Hypothetical protein; KEGG: sco:SCO2233 integral membrane protein.
  
     0.412
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.