STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0179TIGRFAM: esterase, PHB depolymerase family; PFAM: cellulose-binding, family II; type 3a, cellulose-binding domain protein; KEGG: afm:Afu8g06570 acetyl xylan esterase. (656 aa)    
Predicted Functional Partners:
Acel_0372
PFAM: glycoside hydrolase, family 10; KEGG: tfu:Tfu_2791 endo-1,4-beta-xylanase.
 
     0.966
Acel_0135
Cellulase; PFAM: glycoside hydrolase, family 6; KEGG: sma:SAV5217 endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase family 6.
 
     0.672
Acel_0129
PFAM: glycoside hydrolase, family 16; Carbohydrate binding family 6; SMART: cellulose binding, type IV; KEGG: sma:SAV1764 endo-1,3-beta-glucanase.
     0.669
Acel_0066
PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: sma:SAV4624 protease; Serine peptidase; MEROPS family S33.
  
     0.544
Acel_2033
Chitinase family 18; PFAM: Carbohydrate-binding, CenC domain protein domain protein; Carbohydrate-binding family V/XII; KEGG: sma:SAV1751 chitinase A.
  
     0.470
Acel_1718
KEGG: sco:SCO6594 secreted protein.
  
     0.450
Acel_1459
PFAM: Carbohydrate-binding, CenC domain protein domain protein; KEGG: sma:SAV3258 chitinase A.
  
     0.424
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.410
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.