STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0189PFAM: protein of unknown function DUF451; KEGG: sco:SCO2275 putative lipoprotein. (385 aa)    
Predicted Functional Partners:
Acel_0188
PFAM: iron permease FTR1; KEGG: mpa:MAP1762c high-affinity iron transporter.
  
 0.999
Acel_0190
Tat-translocated enzyme; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.991
Acel_0187
Hypothetical protein.
       0.534
Acel_0191
Iron (metal) dependent repressor, DtxR family; PFAM: regulatory protein, MarR; iron dependent repressor; SMART: regulatory protein, Crp; KEGG: sco:SCO4394 iron repressor.
     
 0.484
Acel_0193
PFAM: ABC-2 type transporter; KEGG: sco:SCO5130 putative ABC transporter integral membrane protein.
 
     0.400
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.