STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0253PFAM: ResB family protein; KEGG: tfu:Tfu_2702 putative integral membrane protein. (603 aa)    
Predicted Functional Partners:
Acel_0254
PFAM: cytochrome c assembly protein; KEGG: fra:Francci3_0513 cytochrome c assembly protein.
  
 0.995
Acel_0252
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: tfu:Tfu_2703 putative cytochrome c biogenesis membrane protein.
 
  
 0.984
Acel_0251
PFAM: Redoxin domain protein; KEGG: tfu:Tfu_2704 hypothetical protein.
 
  
 0.857
Acel_0963
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor; PFAM: cytochrome c, class I; KEGG: sco:SCO2150 cytochrome C heme-binding subunit.
 
  
 0.792
Acel_0962
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor; PFAM: Rieske [2Fe-2S] domain protein; KEGG: sco:SCO2149 Rieske iron-sulfur protein.
  
     0.737
Acel_0958
Putative integral membrane protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.728
Acel_0961
PFAM: Cytochrome b/b6, N-terminal domain; KEGG: tfu:Tfu_1019 ubiquinol-cytochrome c reductase, cytochrome b subunit.
  
   
 0.720
Acel_0236
uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: sma:SAV4741 uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase.
  
    0.709
Acel_0250
PFAM: Phosphoglycerate mutase; KEGG: nfa:nfa51590 hypothetical protein.
  
    0.704
Acel_0249
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: fra:Francci3_0473 xylose isomerase-like.
 
     0.631
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.