Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_0337KEGG: fra:Francci3_2435 hypothetical protein. (280 aa)    
Predicted Functional Partners:
Acel_0338
Putative transcriptional regulator, CopG family; PFAM: CopG domain protein DNA-binding domain protein; KEGG: fra:Francci3_2434 hypothetical protein.
 
     0.956
Acel_1464
PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: sma:SAV7483 hypothetical protein.
  
     0.573
Acel_0340
PFAM: ABC-2 type transporter; KEGG: fra:Francci3_1473 ABC-2.
 
     0.571
Acel_2136
KEGG: fra:Francci3_4527 conserved hypothetical protein.
  
     0.482
Acel_0339
KEGG: fra:Francci3_1472 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.479
Acel_1599
KEGG: fra:Francci3_1159 hypothetical protein.
  
   
 0.475
Acel_2041
TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; TOBE domain protein; KEGG: nfa:nfa43270 putative transporter.
  
     0.438
Acel_1552
Transcriptional regulator, SARP family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: sma:SAV3804 transcriptional regulator.
  
     0.424
Acel_0055
KEGG: fra:Francci3_4326 hypothetical protein.
  
     0.413
Acel_0993
KEGG: pac:PPA1652 hypothetical protein.
  
     0.405
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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