Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_0340PFAM: ABC-2 type transporter; KEGG: fra:Francci3_1473 ABC-2. (273 aa)    
Predicted Functional Partners:
Acel_0339
KEGG: fra:Francci3_1472 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.968
Acel_1055
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fra:Francci3_1429 ABC transporter related.
  
 0.746
Acel_0338
Putative transcriptional regulator, CopG family; PFAM: CopG domain protein DNA-binding domain protein; KEGG: fra:Francci3_2434 hypothetical protein.
 
     0.619
Acel_1368
PFAM: ABC-2 type transporter; KEGG: sco:SCO3338 putative integral membrane protein.
  
  
  0.608
Acel_0153
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa37220 putative ABC transporter ATP-binding protein.
 
  
 0.598
Acel_0192
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO2305 putative ABC transporter ATP-binding subunit.
 
  
 0.588
Acel_1367
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO3339 putative ABC transporter ATP-binding subunit.
  
 0.586
Acel_0744
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_0874 ABC transporter related.
  
 0.577
Acel_0337
KEGG: fra:Francci3_2435 hypothetical protein.
 
     0.571
Acel_1414
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV4061 putative ABC transporter ATP-binding protein.
  
 0.540
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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