Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_0356TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: pca:Pcar_2009 phage SPO1 DNA polymerase-related protein. (225 aa)    
Predicted Functional Partners:
Acel_0118
TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: sco:SCO4495 putative DNA polymerase related protein.
  
  
 
0.920
Acel_1903
PFAM: Uracil-DNA glycosylase superfamily; KEGG: fra:Francci3_3919 uracil-DNA glycosylase superfamily.
  
  
 
0.907
Acel_0357
PFAM: protein of unknown function UPF0079; KEGG: sma:SAV4969 hypothetical protein.
       0.788
Acel_0355
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.783
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
      0.674
Acel_0358
PFAM: peptidase M22, glycoprotease; KEGG: sco:SCO4750 hypothetical protein.
  
    0.665
Acel_0359
TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; FR47 domain protein; KEGG: fra:Francci3_0628 ribosomal-protein-alanine acetyltransferase.
  
    0.517
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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