Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0364KEGG: nfa:nfa8910 hypothetical protein. (320 aa)    
Predicted Functional Partners:
Acel_0370
TIGRFAM: chorismate mutase; KEGG: mbo:Mb0973c hypothetical protein.
  
     0.624
Acel_0055
KEGG: fra:Francci3_4326 hypothetical protein.
  
     0.565
Acel_1215
PFAM: protein of unknown function DUF1470; KEGG: sco:SCO7248 hypothetical protein.
  
     0.555
groL2
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.532
Acel_0209
KEGG: nfa:nfa4030 hypothetical protein.
  
     0.463
Acel_0365
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: sma:SAV4998 two-component system response regulator.
       0.446
Acel_2136
KEGG: fra:Francci3_4527 conserved hypothetical protein.
  
     0.434
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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