STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0420PFAM: ABC-2 type transporter; KEGG: cac:CAC2329 polysaccharide ABC transporter, permease component. (268 aa)    
Predicted Functional Partners:
Acel_0421
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA1177 polysaccharide ABC transporter, ATP-binding protein.
 
 0.999
Acel_0422
PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; KEGG: ava:Ava_3349 glycosyl transferase, group 1.
 
  
 0.973
Acel_0725
PFAM: glycosyl transferase, family 2; KEGG: efa:EF2180 glycosyl transferase, group 2 family protein.
 
  
 0.825
Acel_0419
PFAM: glycosyl transferase, group 1; KEGG: fra:Francci3_0720 glycosyl transferase, group 1.
 
  
 0.711
Acel_0426
PFAM: glycosyl transferase, family 2; KEGG: gme:Gmet_2879 glycosyl transferase, family 2.
 
  
 0.675
Acel_1912
PFAM: glycosyl transferase, family 2; KEGG: nfa:nfa23840 putative glycosyltransferase.
 
  
 0.528
Acel_0019
PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tfu:Tfu_3066 tyrosine protein kinase:serine/threonine protein kinase:PASTA.
  
    0.505
Acel_0986
PFAM: protein of unknown function RIO1; protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: sma:SAV6092 putative eukaryotic-type serine/threonine protein kinase.
  
    0.505
Acel_0448
PFAM: glycosyl transferase, group 1; KEGG: mhu:Mhun_2129 glycosyl transferase, group 1.
 
  
 0.492
Acel_0479
PFAM: glycosyl transferase, family 2; KEGG: sma:SAV835 glycosyltransferase.
 
  
 0.461
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.