STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0423TIGRFAM: SpoIID/LytB domain; PFAM: Stage II sporulation D domain protein; KEGG: dra:DR0572 sporulation protein SpoIID-related protein. (874 aa)    
Predicted Functional Partners:
Acel_0424
PFAM: glycoside hydrolase, family 18; SMART: chitinase II; KEGG: cac:CAC1556 chitinase family protein.
 
   
0.630
Acel_0422
PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; KEGG: ava:Ava_3349 glycosyl transferase, group 1.
  
    0.441
Acel_2014
KEGG: sma:SAV4558 hypothetical protein.
  
     0.425
Acel_0420
PFAM: ABC-2 type transporter; KEGG: cac:CAC2329 polysaccharide ABC transporter, permease component.
       0.420
Acel_0421
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA1177 polysaccharide ABC transporter, ATP-binding protein.
       0.420
Acel_2150
PFAM: Peptidoglycan-binding domain 1 protein; cell wall hydrolase/autolysin; KEGG: fra:Francci3_4538 cell wall hydrolase/autolysin.
  
  
 0.403
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.