STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0430PFAM: regulatory proteins, IclR; KEGG: mta:Moth_0417 transcriptional regulator, IclR family. (255 aa)    
Predicted Functional Partners:
Acel_0604
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sma:SAV5742 calcium-binding protein.
      0.900
Acel_0429
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV5771 alcohol dehydrogenase.
 
     0.811
Acel_1592
Transcriptional regulator, IclR family; PFAM: regulatory proteins, IclR; KEGG: tfu:Tfu_0625 regulatory proteins, IclR.
  
     0.772
Acel_0593
PFAM: Allophanate hydrolase subunit 1; KEGG: fra:Francci3_2974 allophanate hydrolase subunit 1.
  
    0.650
Acel_0594
KEGG: sma:SAV6937 antagonist of KipI; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2.
  
    0.609
Acel_0431
KEGG: bha:BH0491 hypothetical protein.
 
     0.576
Acel_0433
Dihydroxyacid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: ret:RHE_PC00044 dihydroxy-acid dehydratase protein; Belongs to the IlvD/Edd family.
  
  
 0.443
Acel_1852
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: sma:SAV6724 GntR-family transcriptional regulator.
 
  
 0.437
leuC
3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
  
 0.434
Acel_1213
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: sco:SCO3495 putative 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase.
 
   
 0.413
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.