Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_0439KEGG: fra:Francci3_1327 conserved hypothetical protein. (327 aa)    
Predicted Functional Partners:
Acel_0438
PFAM: glycosyl transferase, family 2; KEGG: fra:Francci3_0730 glycosyl transferase, family 2.
 
    0.947
Acel_0822
PFAM: acyltransferase 3; KEGG: mpa:MAP1753 hypothetical protein.
 
     0.607
Acel_0440
Hypothetical protein.
       0.533
Acel_1251
PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: fra:Francci3_3164 hypothetical protein.
  
     0.520
Acel_0437
PFAM: aldehyde dehydrogenase; KEGG: oih:OB2840 aldehyde dehydrogenase.
       0.441
Acel_2111
KEGG: tfu:Tfu_0463 hypothetical protein.
  
     0.420
Acel_0436
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7002 ABC transporter, permease protein; TC 3.A.1.1.-.
       0.401
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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