STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0448PFAM: glycosyl transferase, group 1; KEGG: mhu:Mhun_2129 glycosyl transferase, group 1. (364 aa)    
Predicted Functional Partners:
Acel_0447
PFAM: glycosyl transferase, group 1; KEGG: pfo:Pfl_5687 glycosyl transferase, group 1.
 
    
0.830
Acel_0446
PFAM: glycosyl transferase, group 1; KEGG: ava:Ava_0736 glycosyl transferase, group 1.
 
     0.802
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.788
Acel_0426
PFAM: glycosyl transferase, family 2; KEGG: gme:Gmet_2879 glycosyl transferase, family 2.
 
    0.620
Acel_0421
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA1177 polysaccharide ABC transporter, ATP-binding protein.
 
 
 0.616
fcl
NAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
    0.576
mshA
Glycosyl transferase, group 1; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.
  
     0.515
Acel_0420
PFAM: ABC-2 type transporter; KEGG: cac:CAC2329 polysaccharide ABC transporter, permease component.
 
  
 0.510
Acel_0408
PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: tfu:Tfu_2544 UDP-glucose 6-dehydrogenase.
 
  
 0.466
Acel_1374
Maltooligosyl trehalose hydrolase; KEGG: sco:SCO6078 alpha amylase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.
   
 0.451
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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