STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0462KEGG: fra:Francci3_0749 hypothetical protein. (140 aa)    
Predicted Functional Partners:
Acel_0463
KEGG: sma:SAV5046 hypothetical protein.
 
     0.761
Acel_0882
KEGG: tfu:Tfu_1965 hypothetical protein.
  
     0.686
Acel_1553
KEGG: sma:SAV2634 hypothetical protein.
  
     0.640
Acel_0693
PFAM: Methionine synthase, vitamin-B12 independent; KEGG: tfu:Tfu_0602 hypothetical protein.
  
     0.629
Acel_0007
Hypothetical protein; KEGG: mbo:Mb0007 possible conserved membrane protein.
  
     0.484
Acel_0097
KEGG: nfa:nfa53000 hypothetical protein.
  
     0.483
Acel_0108
KEGG: fra:Francci3_4418 hypothetical protein.
  
     0.476
Acel_1521
PFAM: GCN5-related N-acetyltransferase; KEGG: fra:Francci3_3572 GCN5-related N-acetyltransferase.
  
     0.460
Acel_1845
KEGG: sco:SCO5138 hypothetical protein.
  
     0.419
Acel_1123
KEGG: sma:SAV6312 oxppcycle protein.
  
     0.417
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.