STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0562Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain-like protein; KEGG: gka:GK1441 hypothetical protein. (277 aa)    
Predicted Functional Partners:
Acel_0561
PFAM: diacylglycerol kinase, catalytic region; KEGG: sco:SCO5241 hypothetical protein.
       0.773
Acel_0563
Hypothetical protein.
       0.773
Acel_0564
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: fra:Francci3_3755 sigma 28 subunit; Belongs to the sigma-70 factor family.
       0.773
Acel_0565
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sco:SCO5244 anti-sigma factor.
       0.773
Acel_0570
PFAM: aryldialkylphosphatase; KEGG: tws:TW672 hypothetical protein.
 
     0.659
Acel_0582
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mlr1887 hypothetical protein.
  
     0.541
Acel_0569
KEGG: reu:Reut_C5893 fumarate reductase/succinate dehydrogenase flavoprotein.
  
     0.518
Acel_0583
Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sso:SSO3008 dehydrogenase, putative.
  
     0.483
Acel_0103
PFAM: CutC family protein; KEGG: sma:SAV3917 putative homeostasis protein; Belongs to the CutC family.
 
     0.429
Acel_0566
KEGG: sco:SCO5254 superoxide dismutase.
       0.429
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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