STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0576Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain-like protein; KEGG: sco:SCO4393 hypothetical protein. (282 aa)    
Predicted Functional Partners:
Acel_0582
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mlr1887 hypothetical protein.
 
     0.732
Acel_0577
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mlo:mlr1890 ribose binding protein of ABC transporter; TC 3.A.1.2.-.
 
     0.725
Acel_0570
PFAM: aryldialkylphosphatase; KEGG: tws:TW672 hypothetical protein.
 
     0.698
Acel_0583
Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sso:SSO3008 dehydrogenase, putative.
  
     0.657
Acel_0569
KEGG: reu:Reut_C5893 fumarate reductase/succinate dehydrogenase flavoprotein.
  
     0.647
Acel_0581
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: jan:Jann_1461 oxidoreductase-like.
 
     0.545
Acel_0571
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ath:At2g47130 short-chain dehydrogenase/reductase (SDR) family protein.
  
     0.527
Acel_0574
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: bur:Bcep18194_C7245 transcriptional regulator, GntR family.
 
     0.438
Acel_0578
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr1891 ATP-binding protein of ribose ABC transporter; TC 3.A.1.2.-.
       0.415
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.