STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0582PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mlr1887 hypothetical protein. (305 aa)    
Predicted Functional Partners:
Acel_0581
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: jan:Jann_1461 oxidoreductase-like.
 
  
 0.951
Acel_0583
Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sso:SSO3008 dehydrogenase, putative.
 
    0.743
Acel_0576
Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain-like protein; KEGG: sco:SCO4393 hypothetical protein.
 
     0.732
Acel_1811
PFAM: oxidoreductase domain protein; KEGG: cgb:cg0211 putative oxidoreductase.
 
  
 0.717
Acel_0580
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: mlo:mlr1893 permease protein of ribose ABC transporter; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 
    0.679
Acel_0577
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mlo:mlr1890 ribose binding protein of ABC transporter; TC 3.A.1.2.-.
 
    0.654
Acel_0579
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: mlo:mlr1892 permease protein of ribose ABC transporter; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
  
    0.547
Acel_0562
Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain-like protein; KEGG: gka:GK1441 hypothetical protein.
  
     0.541
Acel_0569
KEGG: reu:Reut_C5893 fumarate reductase/succinate dehydrogenase flavoprotein.
  
     0.523
xylB
TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: tfu:Tfu_1604 xylulokinase.
  
 
 0.522
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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