STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0585KEGG: tfu:Tfu_0565 hypothetical protein. (60 aa)    
Predicted Functional Partners:
Acel_0586
TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component; catalytic domain of components of various dehydrogenase complexes; Transketolase, central region; KEGG: tfu:Tfu_0566 2-oxoglutarate dehydrogenase, E1 component.
       0.762
Acel_0754
KEGG: fra:Francci3_1217 conserved hypothetical protein.
  
     0.752
Acel_0753
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: tfu:Tfu_2185 elongator protein 3/MiaB/NifB.
  
     0.699
Acel_1767
KEGG: fra:Francci3_1839 hypothetical protein.
  
     0.535
Acel_0947
KEGG: fra:Francci3_3127 conserved hypothetical protein.
  
     0.486
Acel_1958
PFAM: regulatory protein, MarR; KEGG: fra:Francci3_2291 transcriptional regulator, MarR family.
  
     0.474
Acel_0253
PFAM: ResB family protein; KEGG: tfu:Tfu_2702 putative integral membrane protein.
  
     0.440
Acel_0981
KEGG: tfu:Tfu_1035 hypothetical protein.
  
     0.439
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.