STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0597PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV4258 putative ABC transporter ATP-binding protein. (558 aa)    
Predicted Functional Partners:
Acel_0598
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO3947 putative ABC transporter.
 
0.999
Acel_0599
TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: mta:Moth_2096 cytochrome d ubiquinol oxidase, subunit II.
 
  
 0.994
Acel_0600
PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: tfu:Tfu_0638 putative cytochrome oxidase subunit I.
  
 0.984
Acel_0601
PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: fra:Francci3_3829 twin-arginine translocation protein TatB.
       0.419
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.