Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_0607PFAM: major facilitator superfamily MFS_1; KEGG: fra:Francci3_1554 major facilitator superfamily MFS_1. (582 aa)    
Predicted Functional Partners:
Acel_0606
PFAM: regulatory protein, MarR; KEGG: fra:Francci3_0086 transcriptional regulator, MarR family.
       0.763
Acel_1663
Physarolisin II; PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sma:SAV5949 serine protease, subtilase family; Serine peptidase; MEROPS family S53.
  
     0.547
Acel_1461
PFAM: putative cell wall binding repeat 2-containing protein; KEGG: scpA; kumamolisin.
  
     0.496
Acel_1067
PFAM: GPR1/FUN34/yaaH family protein; KEGG: ani:AN5226.2 hypothetical protein.
  
     0.479
Acel_0608
PFAM: protein of unknown function DUF62; KEGG: tfu:Tfu_0222 hypothetical protein.
       0.471
Acel_1423
Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: ava:Ava_4152 dienelactone hydrolase.
 
    0.444
Acel_1679
Protease-like protein; KEGG: cvi:CV3519 probable periplasmic aspartyl protease.
  
     0.433
Acel_0904
KEGG: fra:Francci3_2206 hypothetical protein.
  
 
   0.430
Acel_0402
SMART: Pyrrolo-quinoline quinone; KEGG: spn:SP1772 cell wall surface anchor family protein.
  
     0.402
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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