STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0614Glycoside hydrolase, family 5; Has a very high specific activity on carboxymethylcellulose. (562 aa)    
Predicted Functional Partners:
Acel_0970
PFAM: glycoside hydrolase, family 9; cellulose-binding, family II; KEGG: tfu:Tfu_2176 cellulase., cellulose 1,4-beta-cellobiosidase.
 
0.989
Acel_0615
PFAM: glycoside hydrolase, family 6; cellulose-binding, family II; type 3a, cellulose-binding domain protein; glycoside hydrolase, family 12; Fibronectin, type III domain protein; KEGG: sma:SAV557 cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
 
0.974
Acel_0135
Cellulase; PFAM: glycoside hydrolase, family 6; KEGG: sma:SAV5217 endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase family 6.
 0.973
Acel_0133
Broad-specificity cellobiase; PFAM: glycoside hydrolase, family 1; KEGG: sco:SCO7558 putative beta-glucosidase.
    
 0.950
Acel_1701
Processive endocellulase; PFAM: glycoside hydrolase, family 9; cellulose-binding, family II; type 3a, cellulose-binding domain protein; Fibronectin, type III domain protein; KEGG: tfu:Tfu_2176 cellulase., cellulose 1,4-beta-cellobiosidase.
 
0.950
Acel_1659
Beta-glucosidase; PFAM: glycoside hydrolase, family 3 domain protein; KEGG: aor:AO090010000034 beta-glucosidase-related glycosidases.
 
  
 0.938
Acel_1883
PFAM: protein of unknown function DUF255; KEGG: tfu:Tfu_0451 conserved hypothetical protein.
   
 
 0.910
Acel_0372
PFAM: glycoside hydrolase, family 10; KEGG: tfu:Tfu_2791 endo-1,4-beta-xylanase.
 
 
 0.881
Acel_0616
PFAM: glycoside hydrolase, family 5; cellulose-binding, family II; type 3a, cellulose-binding domain protein; KEGG: bld:BLi01883 hypothetical protein.
 
 
0.802
Acel_0129
PFAM: glycoside hydrolase, family 16; Carbohydrate binding family 6; SMART: cellulose binding, type IV; KEGG: sma:SAV1764 endo-1,3-beta-glucanase.
 
   
 0.792
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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