STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0619PFAM: cellulose-binding, family II; glycoside hydrolase, family 12; KEGG: sma:SAV555 endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (403 aa)    
Predicted Functional Partners:
Acel_0372
PFAM: glycoside hydrolase, family 10; KEGG: tfu:Tfu_2791 endo-1,4-beta-xylanase.
   
 0.897
Acel_0135
Cellulase; PFAM: glycoside hydrolase, family 6; KEGG: sma:SAV5217 endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase family 6.
 
     0.885
Acel_2033
Chitinase family 18; PFAM: Carbohydrate-binding, CenC domain protein domain protein; Carbohydrate-binding family V/XII; KEGG: sma:SAV1751 chitinase A.
  
   
 0.753
Acel_0129
PFAM: glycoside hydrolase, family 16; Carbohydrate binding family 6; SMART: cellulose binding, type IV; KEGG: sma:SAV1764 endo-1,3-beta-glucanase.
 
   
 0.698
Acel_1459
PFAM: Carbohydrate-binding, CenC domain protein domain protein; KEGG: sma:SAV3258 chitinase A.
  
     0.676
Acel_1460
PFAM: glycoside hydrolase, family 18; Carbohydrate-binding, CenC domain protein domain protein; Carbohydrate-binding family V/XII; SMART: chitinase II; KEGG: cvi:CV4240 probable chitinase.
  
     0.666
Acel_1458
PFAM: glycoside hydrolase, family 18; Carbohydrate-binding, CenC domain protein domain protein; SMART: chitinase II; KEGG: sma:SAV3258 chitinase A; Belongs to the glycosyl hydrolase 18 family.
  
     0.659
Acel_1718
KEGG: sco:SCO6594 secreted protein.
  
     0.651
Acel_0603
PFAM: glycoside hydrolase, family 18; SMART: chitinase II; KEGG: cvi:CV4240 probable chitinase; Belongs to the glycosyl hydrolase 18 family.
  
     0.647
Acel_0970
PFAM: glycoside hydrolase, family 9; cellulose-binding, family II; KEGG: tfu:Tfu_2176 cellulase., cellulose 1,4-beta-cellobiosidase.
 
 
0.505
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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