STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0688PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sma:SAV2756 putative pyridoxal-phosphate-dependent aminotransferase. (418 aa)    
Predicted Functional Partners:
Acel_1139
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: fra:Francci3_1665 SUF system FeS assembly protein.
  
 0.998
Acel_1777
PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: sco:SCO5178 putative sulfurylase.
   
 0.991
Acel_1439
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sco:SCO7475 putative phenylacetic acid degradation NADH oxidoreductase PaaE.
  
 0.960
Acel_0059
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: tfu:Tfu_2719 thiosulfate sulfurtransferase.
   
 0.917
Acel_1417
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: sco:SCO5854 thiosulfate sulfurtransferase.
   
 0.917
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
  
 0.905
Acel_0524
PFAM: SirA family protein; KEGG: afu:AF0556 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
   
 
 0.861
Acel_1768
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: fra:Francci3_3787 UBA/ThiF-type NAD/FAD binding fold.
   
 0.827
Acel_2061
TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: nfa:nfa2620 putative transcriptional regulator.
  
  
 0.822
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
 
 0.793
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.