STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0730KEGG: mca:MCA1140 hydrogenase subunit. (224 aa)    
Predicted Functional Partners:
Acel_0728
PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: dsy:DSY3115 formate hydrogenlyase subunit 5 precursor.
 
  
 0.999
Acel_0727
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: ade:Adeh_3660 NADH ubiquinone oxidoreductase, 20 kDa subunit.
 
  
 0.985
Acel_0731
PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: sso:SSO1026 formate hydrogenlyase subunit 4 (HycD).
 
  
 0.971
Acel_0726
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rfr:Rfer_3292 NADH dehydrogenase (quinone).
 
  
 0.970
Acel_0729
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: eca:ECA1242 NADH dehydrogenase subunit N.
 
  
 0.970
Acel_0724
PFAM: major facilitator superfamily MFS_1; KEGG: gme:Gmet_0906 major facilitator superfamily MFS_1.
 
     0.729
Acel_0734
SMART: DNA mismatch repair protein MutS domain protein; KEGG: tte:TTE1906 MutS-like ATPase involved in mismatch repair, family 2.
 
     0.651
Acel_0735
PFAM: DNA mismatch repair protein MutS domain protein; KEGG: tvo:TVN0675 MutS-like ATPase involved in mismatch repair.
 
     0.643
Acel_0725
PFAM: glycosyl transferase, family 2; KEGG: efa:EF2180 glycosyl transferase, group 2 family protein.
 
     0.562
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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