STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0740KEGG: lma:LmjF35.0290 hypothetical protein, conserved. (439 aa)    
Predicted Functional Partners:
Acel_0034
KEGG: syw:SYNW2303 hypothetical protein.
  
     0.744
Acel_0621
KEGG: cyb:CYB_0085 hypothetical protein.
  
     0.703
Acel_1727
PFAM: beta-lactamase domain protein; KEGG: dre:564200 similar to CG9117-PA.
  
     0.683
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.522
Acel_0742
TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: sco:SCO2614 folylpolyglutamate synthase.
       0.522
Acel_0743
KEGG: lxx:Lxx07990 membrane protein.
       0.522
Acel_0025
PFAM: Kelch repeat-containing protein; KEGG: xla:446327 influenza virus NS1A binding protein Pfam: BTB Herpes_UL33 BACK Kelch_1 Kelch_2 PROSITE: BTB.
  
     0.488
Acel_0744
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_0874 ABC transporter related.
       0.471
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
     0.403
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.