STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0750PFAM: Rod shape-determining protein MreD; KEGG: sco:SCO2609 rod shape-determining protein. (171 aa)    
Predicted Functional Partners:
Acel_0749
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.997
Acel_0751
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: sco:SCO2608 penicillin binding protein.
 
  
 0.937
Acel_0752
PFAM: cell cycle protein; KEGG: fra:Francci3_1215 cell cycle protein; Belongs to the SEDS family.
 
  
 0.899
Acel_0748
TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: fra:Francci3_1211 cell shape determining protein, MreB/Mrl family.
 
  
 0.828
Acel_1500
KEGG: sco:SCO5751 hypothetical protein.
 
  
 0.730
Acel_1797
KEGG: sma:SAV3104 hypothetical protein.
  
     0.684
Acel_0245
KEGG: sma:SAV5282 hypothetical protein.
  
     0.679
Acel_1974
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sma:SAV4615 anti-sigma factor.
  
     0.669
Acel_2014
KEGG: sma:SAV4558 hypothetical protein.
  
     0.653
Acel_2037
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sco:SCO0542 hypothetical regulatory protein.
  
     0.646
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.