Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Acel_0753PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: tfu:Tfu_2185 elongator protein 3/MiaB/NifB. (654 aa)    
Predicted Functional Partners:
Acel_0754
KEGG: fra:Francci3_1217 conserved hypothetical protein.
    0.995
Acel_0585
KEGG: tfu:Tfu_0565 hypothetical protein.
  
     0.699
Acel_0755
TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sco:SCO2599 hypothetical protein.
       0.598
Acel_0751
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: sco:SCO2608 penicillin binding protein.
       0.569
Acel_0752
PFAM: cell cycle protein; KEGG: fra:Francci3_1215 cell cycle protein; Belongs to the SEDS family.
       0.569
Acel_0749
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
       0.525
Acel_0750
PFAM: Rod shape-determining protein MreD; KEGG: sco:SCO2609 rod shape-determining protein.
       0.525
rplU
LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.467
rpmA
PFAM: ribosomal protein L27; KEGG: tfu:Tfu_2181 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
       0.453
Acel_0781
Coproporphyrinogen III oxidase, anaerobic; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.445
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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