STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0807KEGG: sco:SCO2461 secreted protein. (110 aa)    
Predicted Functional Partners:
Acel_1974
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sma:SAV4615 anti-sigma factor.
  
    0.695
Acel_1833
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dvu:DVU1449 anti-anti-sigma factor, putative; Belongs to the anti-sigma-factor antagonist family.
  
    0.652
Acel_1797
KEGG: sma:SAV3104 hypothetical protein.
  
     0.573
Acel_0949
KEGG: sco:SCO2169 integral membrane protein.
  
     0.471
Acel_1249
KEGG: sma:SAV6494 hypothetical protein.
  
     0.463
Acel_1150
PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
   
    0.448
Acel_1975
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: fra:Francci3_4302 anti-sigma-factor antagonist (STAS) domain protein.
   
    0.448
Acel_1369
PFAM: sporulation and cell division protein SsgA; KEGG: sco:SCO1541 regulator.
  
     0.446
Acel_2019
KEGG: tfu:Tfu_0026 hypothetical protein.
  
     0.439
Acel_1408
KEGG: sco:SCO5855 DNA-binding protein.
  
     0.438
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.