STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0810TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; KEGG: mca:MCA0279 DNA binding domain, excisionase family. (60 aa)    
Predicted Functional Partners:
Acel_0811
KEGG: noc:Noc_0055 hypothetical protein.
 
     0.749
Acel_0812
KEGG: noc:Noc_0056 hypothetical protein.
 
     0.701
Acel_0813
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: bth:BT3327 ATP-dependent DNA helicase RecG.
       0.555
Acel_0818
KEGG: noc:Noc_0065 hypothetical protein.
 
     0.549
Acel_0816
PFAM: SNF2-related protein; helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD/DEAH box helicase domain protein; KEGG: noc:Noc_0063 type III restriction enzyme, res subunit.
 
     0.537
Acel_0814
KEGG: noc:Noc_0059 hypothetical protein.
 
     0.505
Acel_0817
KEGG: noc:Noc_0064 hypothetical protein.
 
     0.473
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.