STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0846PFAM: NLP/P60 protein; Lytic transglycosylase, catalytic; Transglycosylase domain protein; KEGG: mta:Moth_1608 lytic transglycosylase, catalytic. (325 aa)    
Predicted Functional Partners:
Acel_0843
Flagellar biosynthesis/type III secretory pathway protein-like protein; KEGG: rfr:Rfer_0552 flagellar assembly protein FliH.
 
    0.914
fliE
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: lxx:Lxx06330 flagellar basal-body protein.
 
    0.879
Acel_0853
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
   0.876
Acel_0838
Flagellar basal-body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.861
Acel_0841
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
    0.850
Acel_0848
PFAM: flagellar hook capping protein; KEGG: chy:CHY_0999 flagellar hook assembly protein.
 
    0.846
Acel_0852
PFAM: OmpA/MotB domain protein; KEGG: chy:CHY_0964 flagellar motor protein MotB.
 
  
 0.828
Acel_0842
PFAM: flagellar motor switch protein FliG; KEGG: bga:BG0293 flagellar motor switch protein.
  
    0.813
Acel_0844
Type III secretion system ATPase, FliI/YscN; KEGG: lxx:Lxx06360 flagellum-like ATP synthase; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase.
  
    0.813
Acel_0847
PFAM: flagellar hook-length control protein; KEGG: rsp:RSP_0058 FliK, flagellar hook-length control protein.
  
    0.798
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.