STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0879Transcriptional regulator, CdaR family; KEGG: sco:SCO2386 hypothetical protein. (384 aa)    
Predicted Functional Partners:
Acel_0878
(acyl-carrier-protein) S-malonyltransferase-like protein; KEGG: fra:Francci3_3481 S-malonyltransferase.
 
     0.847
fabH
3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
 
     0.647
Acel_0288
KEGG: sco:SCO4636 hypothetical protein; Belongs to the UPF0336 family.
  
     0.591
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
     
 0.570
Acel_1613
PFAM: thioesterase superfamily protein; KEGG: sco:SCO2676 hypothetical protein.
  
     0.532
Acel_0289
PFAM: MaoC domain protein dehydratase; KEGG: sco:SCO4637 hypothetical protein.
  
     0.508
Acel_0880
KEGG: fra:Francci3_3058 hypothetical protein.
       0.498
Acel_0209
KEGG: nfa:nfa4030 hypothetical protein.
  
     0.495
Acel_1165
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sco:SCO1676 hypothetical protein.
 
     0.494
Acel_0933
PFAM: Abortive infection protein; KEGG: sma:SAV6992 hypothetical protein.
  
     0.467
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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