STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0882KEGG: tfu:Tfu_1965 hypothetical protein. (149 aa)    
Predicted Functional Partners:
Acel_1521
PFAM: GCN5-related N-acetyltransferase; KEGG: fra:Francci3_3572 GCN5-related N-acetyltransferase.
  
     0.752
Acel_1404
KEGG: tfu:Tfu_1939 hypothetical protein.
  
     0.749
Acel_0881
PFAM: Pirin domain protein domain protein; KEGG: mbo:Mb0187c hypothetical protein; Belongs to the pirin family.
       0.732
Acel_0693
PFAM: Methionine synthase, vitamin-B12 independent; KEGG: tfu:Tfu_0602 hypothetical protein.
  
     0.724
rbpA
Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.709
Acel_0108
KEGG: fra:Francci3_4418 hypothetical protein.
  
     0.708
Acel_0007
Hypothetical protein; KEGG: mbo:Mb0007 possible conserved membrane protein.
  
     0.687
Acel_0462
KEGG: fra:Francci3_0749 hypothetical protein.
  
     0.686
Acel_1592
Transcriptional regulator, IclR family; PFAM: regulatory proteins, IclR; KEGG: tfu:Tfu_0625 regulatory proteins, IclR.
  
     0.673
Acel_1980
PFAM: type II secretion system protein; KEGG: tfu:Tfu_0126 putative integral membrane protein.
  
     0.633
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.