STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0888PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mba:Mbar_A1030 ABC transporter, ATP-binding protein. (284 aa)    
Predicted Functional Partners:
Acel_0887
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0644 ABC transporter, inner membrane subunit.
 
 0.992
Acel_0886
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2598 ABC transporter, inner membrane subunit.
 
 
 0.990
Acel_0889
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: reu:Reut_A2720 extracellular solute-binding protein, family 3.
 
 
 0.960
Acel_2039
NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    0.928
Acel_1119
KEGG: tfu:Tfu_1630 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.899
Acel_0893
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: ypm:pMT054 putative periplasmic protein.
  
 
 0.805
Acel_1565
PFAM: nitrogen regulatory protein P-II; KEGG: sma:SAV5593 putative nitrogen regulatory protein P-II.
    
 
 0.622
Acel_1777
PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: sco:SCO5178 putative sulfurylase.
     
 0.504
Acel_1451
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH976 ABC transporter ATP-binding protein.
 
    
0.501
Acel_2055
PFAM: thiamineS protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: pai:PAE2577 ferredoxin-nitrite reductase.
     
 0.467
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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