Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_0893ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: ypm:pMT054 putative periplasmic protein. (305 aa)    
Predicted Functional Partners:
Acel_0894
KEGG: dsy:DSY0977 hypothetical protein.
 
     0.852
infA
Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
   
    0.837
Acel_1337
PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: fra:Francci3_2611 peptidylprolyl isomerase, FKBP-type.
   
    0.837
Acel_0888
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mba:Mbar_A1030 ABC transporter, ATP-binding protein.
  
 
 0.805
Acel_0886
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2598 ABC transporter, inner membrane subunit.
  
 
 0.770
Acel_0887
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0644 ABC transporter, inner membrane subunit.
  
 
 0.770
Acel_0890
PFAM: protein of unknown function DUF1100, hydrolase family protein; KEGG: cvi:CV0865 probable dipeptidyl aminopeptidase; Belongs to the UPF0255 family.
 
     0.754
Acel_0891
PFAM: Carboxymuconolactone decarboxylase; KEGG: bte:BTH_I0996 carboxymuconolactone decarboxylase family protein.
 
    0.736
Acel_1043
PFAM: peptidase M24; KEGG: hma:rrnB0212 aminopeptidase.
  
     0.714
Acel_0892
Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: reu:Reut_B5848 periplasmic binding protein/LacI transcriptional regulator.
 
     0.670
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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