STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0894KEGG: dsy:DSY0977 hypothetical protein. (405 aa)    
Predicted Functional Partners:
Acel_0897
PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bja:blr6047 putative oxidoreductase protein.
 
     0.855
Acel_0893
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: ypm:pMT054 putative periplasmic protein.
 
     0.852
Acel_0895
PFAM: Carboxymuconolactone decarboxylase; KEGG: rba:RB4395 probable macrophage infectivity potentiator protein Mip.
 
     0.813
Acel_0896
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pae:PA1602 probable oxidoreductase.
       0.773
Acel_0891
PFAM: Carboxymuconolactone decarboxylase; KEGG: bte:BTH_I0996 carboxymuconolactone decarboxylase family protein.
  
     0.676
Acel_0898
PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: pae:PA2199 probable dehydrogenase.
 
     0.559
Acel_1639
PFAM: Asp/Glu racemase; KEGG: pab:PAB2420 arylmalonate decarboxylase.
  
     0.515
Acel_1043
PFAM: peptidase M24; KEGG: hma:rrnB0212 aminopeptidase.
 
     0.433
Acel_1041
PFAM: Cupin 2, conserved barrel domain protein.
 
     0.423
Acel_0892
Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: reu:Reut_B5848 periplasmic binding protein/LacI transcriptional regulator.
       0.421
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.