Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_0898PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: pae:PA2199 probable dehydrogenase. (314 aa)    
Predicted Functional Partners:
Acel_0893
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: ypm:pMT054 putative periplasmic protein.
 
     0.598
Acel_0894
KEGG: dsy:DSY0977 hypothetical protein.
 
     0.559
Acel_0899
Hypothetical protein.
       0.478
Acel_0900
PFAM: protein of unknown function DUF34; KEGG: mpa:MAP1982c hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
       0.478
Acel_0895
PFAM: Carboxymuconolactone decarboxylase; KEGG: rba:RB4395 probable macrophage infectivity potentiator protein Mip.
       0.467
Acel_0896
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pae:PA1602 probable oxidoreductase.
       0.464
Acel_0897
PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bja:blr6047 putative oxidoreductase protein.
       0.464
Acel_0902
PFAM: ribonuclease H; Phosphoglycerate mutase; KEGG: tfu:Tfu_1953 hypothetical protein.
       0.450
Acel_0901
PFAM: protein of unknown function DUF164; KEGG: fra:Francci3_1437 protein of unknown function DUF164.
       0.431
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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