STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0905PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: sme:SMb20749 putative D-mannonate oxidoreductase protein. (493 aa)    
Predicted Functional Partners:
Acel_0048
D-mannonate dehydratase; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: ccr:CC2812 mandelate racemase / muconate lactonizing enzyme family.
 
  
 0.977
Acel_0716
PFAM: phosphoribulokinase/uridine kinase; KEGG: rfr:Rfer_2550 hypothetical protein.
     0.739
Acel_0904
KEGG: fra:Francci3_2206 hypothetical protein.
       0.648
gpsA
PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: sma:SAV2680 putative glycerol-3-phosphate dehydrogenase, NAD(P)H-dependent.
      
 0.495
Acel_0903
Arsenite efflux membrane protein ArsB (TC 3.A.4.1.1; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: lxx:Lxx13260 arsenical pump membrane protein; TC 3.A.4.1.1; TC 2.A.45.1.1.
       0.472
xylB
TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: tfu:Tfu_1604 xylulokinase.
 
   
 0.420
pgk
Phosphoglycerate kinase / triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
     
 0.415
Acel_0604
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sma:SAV5742 calcium-binding protein.
 
   
 0.405
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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