Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Acel_0914Hypothetical protein. (184 aa)    
Predicted Functional Partners:
Acel_0913
Hypothetical protein.
       0.773
Acel_0915
Uncharacterized membrane-associated protein-like protein; KEGG: sma:SAV3633 hypothetical protein.
       0.746
Acel_0912
Phospholipid-binding protein, PBP family; TIGRFAM: YbhB and YbcL; PFAM: PEBP family protein; KEGG: fra:Francci3_0033 phospholipid-binding protein.
       0.497
Acel_0911
PFAM: Siderophore-interacting protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: tfu:Tfu_1860 iron-chelator utilization protein.
       0.410
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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