STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0922Hypothetical protein; KEGG: sco:SCO2233 integral membrane protein. (329 aa)    
Predicted Functional Partners:
Acel_1663
Physarolisin II; PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sma:SAV5949 serine protease, subtilase family; Serine peptidase; MEROPS family S53.
  
     0.548
Acel_0485
KEGG: fra:Francci3_2900 putative integral membrane protein.
 
    0.498
Acel_0946
TIGRFAM: LPXTG-motif cell wall anchor domain; KEGG: sco:SCO2321 secreted protein.
 
     0.489
Acel_0980
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sco:SCO2125 hypothetical protein.
 
  
 0.472
Acel_0923
L-glutamine synthetase; KEGG: sma:SAV6005 putative glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.
       0.452
Acel_1331
KEGG: fra:Francci3_3215 putative secreted protein.
  
     0.418
Acel_0171
KEGG: sco:SCO3177 hypothetical protein.
  
     0.412
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.