STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0925KEGG: mpa:MAP1960 hypothetical protein. (240 aa)    
Predicted Functional Partners:
Acel_1223
Transcriptional regulator, MerR family; SMART: regulatory protein, MerR; KEGG: mpa:MAP1543 hypothetical protein.
  
     0.761
Acel_1404
KEGG: tfu:Tfu_1939 hypothetical protein.
  
     0.759
rbpA
Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.754
Acel_1486
PFAM: protein of unknown function DUF349; KEGG: fra:Francci3_0461 protein of unknown function DUF349.
  
     0.722
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
  
     0.689
Acel_0949
KEGG: sco:SCO2169 integral membrane protein.
 
     0.667
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.630
Acel_0370
TIGRFAM: chorismate mutase; KEGG: mbo:Mb0973c hypothetical protein.
  
     0.617
Acel_1386
KEGG: sco:SCO6030 hypothetical protein.
  
     0.611
Acel_0004
PFAM: protein of unknown function DUF721; KEGG: sma:SAV4320 hypothetical protein.
  
     0.606
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.