STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0929PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV4867 putative ABC transporter ATP-binding protein. (318 aa)    
Predicted Functional Partners:
Acel_0928
KEGG: sma:SAV4868 putative ABC transporter membrane protein.
 
 
 0.972
Acel_0930
KEGG: sma:SAV4866 hypothetical protein.
 
     0.946
Acel_0558
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sma:SAV3962 putative ABC transporter ATP-binding protein; TC 3.A.1.1.-.
 
     
0.899
Acel_0910
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll1054 ABC transporter ATP-binding protein; TC 3.A.1.4.-.
 
     
0.898
Acel_1179
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa46550 putative ABC transporter ATP-binding protein.
 
   
0.639
Acel_1142
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: fra:Francci3_1676 ABC transporter related.
  
 0.637
Acel_0931
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: nfa:nfa31920 putative serine/threonine protein kinase.
  
    0.577
Acel_0340
PFAM: ABC-2 type transporter; KEGG: fra:Francci3_1473 ABC-2.
  
 0.486
Acel_0933
PFAM: Abortive infection protein; KEGG: sma:SAV6992 hypothetical protein.
  
    0.419
Acel_0932
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nfa:nfa1410 hypothetical protein.
       0.406
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.