Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_0933PFAM: Abortive infection protein; KEGG: sma:SAV6992 hypothetical protein. (296 aa)    
Predicted Functional Partners:
Acel_0932
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nfa:nfa1410 hypothetical protein.
       0.762
Acel_1962
Coenzyme F420-0 gamma-glutamyl ligase; TIGRFAM: F420-dependent oxidoreductase, putative; PFAM: nitroreductase; protein of unknown function DUF129; KEGG: sco:SCO3037 putative oxidoreductase.
 
  
 0.566
Acel_0931
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: nfa:nfa31920 putative serine/threonine protein kinase.
       0.525
Acel_0879
Transcriptional regulator, CdaR family; KEGG: sco:SCO2386 hypothetical protein.
  
     0.467
Acel_0929
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV4867 putative ABC transporter ATP-binding protein.
  
    0.417
Acel_0249
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: fra:Francci3_0473 xylose isomerase-like.
 
     0.415
Acel_1721
KEGG: fra:Francci3_0337 conserved hypothetical protein.
  
     0.415
Acel_0930
KEGG: sma:SAV4866 hypothetical protein.
       0.401
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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